hCov-229E-ORF1ab/RdRP Pseudovirus Standard Reference

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RQV30011
I. Background

   Both HCoV-229E and HCoV-OC43 were discovered in the 1960s and have been recognized as the cause of the common cold for many years, and have caused frequent reinfections throughout life. Among adults, these viruses account for 4% to 15% of acute respiratory diseases each year, and as high as 35% during peak periods. The annual incidence of children reaches 8%, and the highest incidence is as high as 20%. According to reports, the frequency of infection of the 229E and OC43 viruses in adults ranges from 15 to 25 per 100 people per year, of which 80% of the infected people are those who previously had antibodies to the infected virus.

   According to the introduction of CDC and WHO, the diagnosis of nucleic acid for HCoV-229E is generally for RdRP (RNA-dependent RNA polymerase), Gene N and Gene E, and Gene S is more used for the development of corresponding drugs and vaccines. The sequence included in NCBI is NC_002645.1, with a total length of 27317bp, and the gene encodes 4 structural proteins: S, M, N and E.

   In the past, the performance evaluation of the detection limit of the kit was generally to select RNA transcribed in vitro or clinically positive virus as a standard for performance evaluation. However, both have obvious determinations. First, RNA transcribed in vitro is generally very pure, single, does not involve extraction, and does not conform to the microenvironment of clinical viruses. Therefore, it will inevitably cause the detection sensitivity to be overestimated, which is also a high probability of false The main reason for negative; once again clinically positive viruses, even inactivated viruses, have great potential for biological safety, so the laboratory level is required to be P3-P4, and most of the diagnostic kits developed do not meet the requirements for change Clinical positive viruses are also very limited in source and cannot be supplied steadily. They have been used repeatedly for kit performance evaluation.


II.Product description

   It has the complete envelope structure of the virus and the nucleic acid sequence corresponding to HCoV-229E, but the pseudovirus standard with low biological safety risk perfectly overcomes the shortcomings of selecting RNA transcribed in vitro or clinically positive virus as the standard It is very suitable for standard products used for nucleic acid diagnostic performance evaluation.

   Construction process: hCov-229E gene synthesis → fake virus packaging → purification → QC detection (ddPCR)


III. Product information
Product name:hCov-229E-ORF1ab/RdRP Pseudovirus Standard Reference
Corresponding sequence (see appendix for details):

ORF1ab/RdRP(2780bp)

Specifications:1ml
Copy number:
Biosecurity level:P2
Transportation and storage:Dry ice transportation, stored at -80℃
Validity period:

IV. Product use and advantages
Product Usage:Performance evaluation of HCoV-229E diagnostic kit
Product advantages:·The fake virus standard of HCoV-229E is different from RNA synthesized in vitro and live clinically positive virus, which perfectly overcomes the shortcomings of the two, and is truly suitable for performance evaluation of the kit, including detection limit, specificity, repeatability, etc;

· According to the characteristics of HCoV-229E coronavirus, a total of 3 sequences of ORF1ab / RdRP (RNA-dependent RNA polymerase), Gene E (envelope protein) and Gene N (nucleocapsid phosphoprotein) were selected for the packaging of pseudoviruses. Three sections well characterize the HCoV-229E feature sequence;

· Reqbio Bio has designed the primer and probe sequences of the ddPCR system, which can complete the QC copy number detection of pseudoviruses without the need to construct a standard curve. It very accurately characterizes the copy number of standard products and overcomes the CT value of Q-PCR analysis The inaccuracy of the relative judgment standard;

· Pseudovirus standard, non-pathogenic, reproducible, reliable quality control method, stable between batches, stable and long-term preparation and supply, and requires laboratory biosecurity level P2, to meet the safety needs of many units.


Ⅴ. Appendix

ORF1ab/RdRP:

1 agttttgata gcagttattt aaacgagtca ggggctctag tgccgctcga ctagagccct
       61 gtaatggtac agacatagat tactgtgtcc gtgcatttga cgtttacaat aaagatgcgt
      121 cttttatcgg aaaaaatctg aagtccaatt gtgtgcgctt caagaatgta gataaggatg
      181 acgcgttcta tattgttaaa cgttgcatta agtcagttat ggaccacgag cagtccatgt
      241 ataacttact taaaggctgt aatgctgttg ctaagcatga tttctttact tggcatgagg
      301 gcagaaccat ttatggtaat gttagtagac aggatcttac taaatacacc atgatggatt
      361 tgtgcttcgc tctgcgtaac tttgatgaaa aagattgtgg agtttttaag gagatattgg
      421 ttcttactgg ttgttgtaat actgattact ttgaaatgaa gaattggttt gaccccatag
      481 aaaatgagga catacaccgt gtgtatgctg ctttaggcaa ggtagttgca aatgcaatgc
      541 ttaagtgtgt tgctttttgc gacgaaatgg tgctcaaagg agttgttggt gttttgacct
      601 tagacaacca agatcttaat gggaatttct atgacttcgg tgattttgta ttgtgtcctc
      661 ctggaatggg aataccctac tgcacgtcat actatgctta tatgatgcct gttatgggta
      721 tgactaattg tttagctagt gagtgcttta tgaaaagtga catctttggt caagacttca
      781 aaacttttga tttgttgaaa tatgatttca cagaacataa ggaggttttg tttaacaagt
      841 actttaagta ttggggacag gattatcatc ctgattgtgt tgattgccat gacgagatgt
      901 gtattttgca ttgttcaaat tttaacacac tcttcgcaac cacaattcca aacacagctt
      961 ttggacctct gtgcagaaaa gtgtttattg atggtgtacc cgtagttgct actgctggtt
     1021 accactttaa acaattagga cttgtgtgga acaaagatgt taacacccat tctaccagac
     1081 ttactattac tgaactctta cagtttgtga cagatccaac gcttatagtt gcgtcatcgc
     1141 ctgccttggt ggacaaacgc actgtttgtt tttctgtcgc tgctttgagt acaggattaa
     1201 catcccaaac agtaaaacct ggccatttta ataaggagtt ttatgacttc ttacgttctc
     1261 aagggttttt cgatgagggt tcagaattaa cattgaagca tttctttttt acacaaaagg
     1321 gtgatgctgc aattaaagat tttgattatt atcgttacaa cagacctacc attctggata
     1381 ttggacaagc tcgcgtagca tatcaagtgg cagctcgcta ttttgactgt tacgagggtg
     1441 gctgtattac atctagagag gttgttgtta caaaccttaa taaaagcgct ggttggcccc
     1501 ttaataagtt tggtaaagct ggtttatatt atgagtctat tagttatgag gaacaagatg
     1561 ctattttttt attaacaaag cgtaatattc tccctactat gactcagtta aatcttaaat
     1621 atgccatatc tggtaaggaa cgtgcacgta cagtgggtgg cgtctcttta ttagctacta
     1681 tgactacacg acagtttcat cagaaatgtc taaaatccat agtagctacc agaaatgcca
     1741 ctgttgttat cggcactacc aagttttatg gcggttggga taatatgtta aagaacctga
     1801 tggccgatgt tgacgatcct aaattgatgg gatgggacta tcctaagtgc gatagagcta
     1861 tgccctcaat gattcgtatg ttgtcggcta tgattttagg ttctaagcat gtcacatgtt
     1921 gtacggctag tgataaattt tatagactta gtaatgagct tgctcaagtt ttgaccgagg
     1981 ttgtttattc aaatggtggg ttttatttta aacctggtgg tacaacttct ggtgatgcaa
     2041 ctacagccta cgccaattct gtctttaata tatttcaggc tgtaagttct aacattaatt
     2101 gcgttttgag cgttaactcg tcaaattgca ataattttaa tgttaagaag ttacagagac
     2161 aactctatga taattgctat agaaatagta atgttgatga atcttttgtg gatgactttt
     2221 atggttattt gcaaaagcat ttttctatga tgattctttc tgatgatggt gttgtgtgct
     2281 ataataaaac ttatgctgaa cttggttaca ttgctgatat tagtgctttt aaagccactt
     2341 tgtattatca gaatggtgtg tttatgagta cagctaagtg ttggactgag gaagatcttt
     2401 ctataggacc tcatgaattt tgctcacagc acactatgca gattgtagat gaaaatggta
     2461 agtattatct accatatcca gatcctagcc gtattatttc tgctggtgtt tttgtggatg
     2521 acgtcactaa gactgatgct gtcattcttt tggaacgcta tgtttctctg gctatagatg
     2581 catacccatt gtctaagcat cctaaacctg agtacaggaa ggtgttttac gcattgttag
     2641 attgggttaa acatctcaac aagactctta acgaaggtgt tttggagtct ttttctgtta
     2701 cacttttaga tgaacatgag tctaagtttt gggatgaaag cttttatgct agtatgtatg
     2761 agaagtctac agtattacaa

   

Corresponding product line:

 

Catalog ID

Product

Unit Size

Remarks

RQV30001

2019-nCov-ORF1ab/RdRP Pseudovirus Standard Reference

1ml

Contains RdRP fragments(2995bp)

RQV30002

2019-nCov-N Pseudovirus Standard Reference

1ml

Contains Gene N fragments(1260bp)

RQV30003

2019-nCov-E Pseudovirus Standard Reference

1ml

Contains Gene E fragments(228bp)

RQV30004

SARS-ORF1ab/RdRP Pseudovirus Standard Reference

1ml

Contains RdRP fragments(2795bp)

RQV30005

SARS-M Pseudovirus Standard Reference

1ml

Contains Gene M fragments(666bp)

RQV30006

SARS-N Pseudovirus Standard Reference

1ml

Contains Gene N fragments(1207bp)

RQV30007

SARS-E Pseudovirus Standard Reference

1ml

Contains Gene E fragments(231bp)

RQV30008

MERS-ORF1ab/RdRP Pseudovirus Standard Reference

1ml

Contains RdRP fragments(2798bp)

RQV30009

MERS-N Pseudovirus Standard Reference

1ml

Contains Gene N fragments(1242bp)

RQV30010

MERS-uPE/E Pseudovirus Standard Reference

1ml

Contains uPE / E fragments(999bp)

RQV30011

hCov-229E-ORF1ab/RdRP Pseudovirus Standard Reference

1ml

Contains RdRP fragments(2780bp)

RQV30012

hCov-229E-N Pseudovirus Standard Reference

1ml

Contains Gene N fragments(1170bp)

RQV30013

hCov-229E-E Pseudovirus Standard Reference

1ml

Contains Gene E fragments(234bp)

RQV30014

hCov-HKU1-ORF1ab/RdRP Pseudovirus Standard Reference

1ml

Contains RdRP fragments(2783bp)

RQV30015

hCov-HKU1-N Pseudovirus Standard Reference

1ml

Contains Gene N fragments(1326bp)

RQV30016

hCov-HKU1-E Pseudovirus Standard Reference

1ml

Contains Gene E fragments(249bp)

RQV30017

hCov-NL63-ORF1ab/RdRP Pseudovirus Standard Reference

1ml

Contains RdRP fragments(2780bp)

RQV30018

hCov-NL63-N Pseudovirus Standard Reference

1ml

Contains Gene N fragments(1134bp)

RQV30019

hCov-NL63-E Pseudovirus Standard Reference

1ml

Contains Gene E fragments(234bp)

RQV30020

hCov-OC43-ORF1ab/RdRP Pseudovirus Standard Reference

1ml

Contains RdRP fragments(2783bp)

RQV30021

hCov-OC43-N Pseudovirus Standard Reference

1ml

Contains Gene N fragments(1347bp)

RQV30022

hCov-OC43-E Pseudovirus Standard Reference

1ml

Contains Gene E fragments(255bp)